Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788616.1_cds_XP_016471375.1_594
CDS Infomation

[gene=LOC107793439] [db_xref=GeneID:107793439] [protein=transcription factor PIF4-like] [protein_id=XP_016471375.1] [location=join(3404..3471,3559..4318,4401..4499,4601..4666,5278..5343,5464..5766,5879..5968)] [gbkey=CDS]
Sequence

ATGAATCCATGTCTACCTGAATGGAATATTGAGGCTGAACTCCCTGTTCATCAAAAGAAG
CCAATGGGATTTGATCATGAGCTAGTGGAGCTGTTATGGCGAAACGGAGAAGTAGTATTA
CACAGCCAAACACATAAAAAACAGCAAGGCTATGATCCTAATGAATGCAGACAGTTTAAC
AAACATGATCAACAAACAATAAGAGATATTGTCTCCTGTGGAAATCACACCAGTTTGATT
CAAGATGATGAAACTATCTCGTGGCTTAACTGCCCTATCGATGAATCGTTTGAGAAAGAA
TTTTGTTCCCCTTTCTTATCTGAAATTTCAACAAATCCAATTGAGGCTGATAAATCAATT
AGGCAATCAGAGGACAATAAGGCTTTCAAGTTTGATCCTTTAGAGATCAATCATGTTTTT
CCACATTCACATCATTCTAGTTTTGATCCAAATCCAATGCCCCCTCCAAGATTTCACAAC
AGTGTATCAGCACAGAAAAGTGTTAAAAACAATCTTAAGGAGGGGTCTGTGATGACAGTT
GGTTCAAGTCACTGTGGTAGCAATCAAGTTGCCATTGACGCGGATACTAGCCGGTTTTCA
AGCAGTGCAAATATAGGTTTATCTGCAGCAATGATCACTGACTATACTGGTAAAGTTAGT
CCGCAAAGTGATACAATGGACCGAGACACATTTGAACCAGCTAACACATCATCTTCAGGC
GGATCGGGTAGTAGTTATGCTAGAACATGCAATCTATCTGCAGCAACCAATAGTCAAAGC
CACAAAAGGAAAAGTAGAGATGGTGAAGAACCAGAATGCCAAAGTAAAGCAGGTGAGCTA
GAATCAGCTGGAGGAAACAAGTCAGCCCAAAAATCTGGAACTGCACGTAGGAGCCGTGCT
GCAGAAGTGCATAACCTCTCTGAAAGGAGACGGAGGGATAGAATCAATGAGAAGATGAAG
GCCTTGCAAGAGCTTCTTCCTCACTCTACTAAGACAGATAAAGCATCAATGCTGGATGAA
GCTATTGAATACTTAAAGTCACTTCAGATGCAACTTCAGATGATGTGGATGGGAAGTGGC
ATGGCATCAATGATGTTTCCTGGTGTCCAACACTACATGTCCAGAATAGGAATGGGGATG
GGTTCGCCAACGGTTCCTTCCATTCACAATGCCATGCATTTAGCTAGGCTTCCTTTGGTT
GATTCAACAATTCCTATGAATACAGCTGCTCCTAATCAAGCTGCAATATGCCAGAATTCA
ATGTTGAATTCGGTTAACTATCAACGCCATTTGCAGAATCCCAACTTTCAAGACCAATAT
GCCAGTTACATGGGGTTCCATCCACTTCAAGGAGCTTCTCAGCAAATGAACATTTTTGGC
TTAGGTTCACAAACAGCACAGCAAAGTCAGCAGTTACCACATCCTACTAATAGTAATGCA
CCCAACACTTGA

Peptide Sequence

PEP ID

XP_016471375.1
PEP Infomation

PREDICTED: transcription factor PIF4-like [Nicotiana tabacum]
Sequence

MNPCLPEWNIEAELPVHQKKPMGFDHELVELLWRNGEVVLHSQTHKKQQGYDPNECRQFN
KHDQQTIRDIVSCGNHTSLIQDDETISWLNCPIDESFEKEFCSPFLSEISTNPIEADKSI
RQSEDNKAFKFDPLEINHVFPHSHHSSFDPNPMPPPRFHNSVSAQKSVKNNLKEGSVMTV
GSSHCGSNQVAIDADTSRFSSSANIGLSAAMITDYTGKVSPQSDTMDRDTFEPANTSSSG
GSGSSYARTCNLSAATNSQSHKRKSRDGEEPECQSKAGELESAGGNKSAQKSGTARRSRA
AEVHNLSERRRRDRINEKMKALQELLPHSTKTDKASMLDEAIEYLKSLQMQLQMMWMGSG
MASMMFPGVQHYMSRIGMGMGSPTVPSIHNAMHLARLPLVDSTIPMNTAAPNQAAICQNS
MLNSVNYQRHLQNPNFQDQYASYMGFHPLQGASQQMNIFGLGSQTAQQSQQLPHPTNSNA
PNT

Transcript Sequence

Gene sequence data has not been registered.